Breaking

The NIH Somatic Cell Genome Editing program - Nature.com
Apr 07, 2021 7 mins, 55 secs
These strategies include base editing21 (in which fused deaminase enzymes rewrite individual nucleotides without inducing double-strand breaks)22,23,24 and prime editing (in which a fused reverse transcriptase introduces edits templated by an extended guide RNA)25.

These studies highlight the great potential of genome editing to improve human health.

In fact, base editing has already been used to correct pathogenic mutations, and in some cases has resulted in phenotypic rescue of the disease52,53,54,55,56,57,58,59,60,61,62,63.

Along with data, we aim to deliver a collection of tools, reagents, methods and best-practices that will be assembled into the SCGE Toolkit for Therapeutic Genome Editing (or SCGE Toolkit in short, Fig. 1b).

This approach is exemplified by the recent development of Cas12j, the smallest CRISPR–Cas genome editing system yet discovered, which was supported by the SCGE program87.

Major classes of genome editors include nucleases, base editors (BE), prime editors, PNAs, RNA editors and epigenome editors.

However, the broad application of genome editing will require nanoparticles that can target the many different types of tissue in the body.

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Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editorsD

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Base editing: precision chemistry on the genome and transcriptome of living cells.

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Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.

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Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.

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A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.

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Search-and-replace genome editing without double-strand breaks or donor DNA.

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Highly efficient RNA-guided base editing in rabbit.

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Optimized base editors enable efficient editing in cells, organoids and mice.

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Treatment of a metabolic liver disease by in vivo genome base editing in adult mice.

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In vivo base editing of post-mitotic sensory cells.

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Correction of the Marfan syndrome pathogenic FBN1 mutation by base editing in human cells and heterozygous embryos.

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Adenine base editing in mouse embryos and an adult mouse model of Duchenne muscular dystrophy.

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Cytosine and adenine base editing of the brain, liver, retina, heart and skeletal muscle of mice via adeno-associated viruses.

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Therapeutic base editing of human hematopoietic stem cells.

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Adenine base editing in an adult mouse model of tyrosinaemia.

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In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni.

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Versatile and robust genome editing with Streptococcus thermophilus CRISPR1–Cas9.

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A dual-deaminase CRISPR base editor enables concurrent adenine and cytosine editing.

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